This bug is only reproducible starting with release 7.1.0+. It does not reproduce with 7.0.0. Make sure, to test with the latest PMD version. We are finding that the Copy Paste Detector no longer ...
I used GeMoma by with given external annotation external.gff, the command is as follows: java -jar /newlustre/home/xiongqian/software/annotation/gemoma/GeMoMa-1.9.jar ...
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